STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46529.1Type I secretion target repeat protein. (680 aa)    
Predicted Functional Partners:
EET47982.1
Conserved hypothetical protein.
  
  0.783
EET48864.1
Conserved hypothetical protein.
  
  0.776
EET49529.1
Identified by match to protein family HMM PF02485.
  
     0.764
EET46846.1
Conserved hypothetical protein.
  
  0.746
EET46875.1
Conserved hypothetical protein.
  
     0.733
EET49878.1
Conserved hypothetical protein.
  
     0.732
EET47791.1
Capsule polysaccharide modification protein; Identified by match to protein family HMM PF05159.
  
     0.696
EET49138.1
Conserved hypothetical protein.
  
     0.688
EET49131.1
Conserved hypothetical protein.
  
     0.682
EET47914.1
Conserved hypothetical protein.
  
     0.674
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.