Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EET47992.1 | EET48059.1 | TR2A62_1737 | TR2A62_2427 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.945 |
| EET47992.1 | EET48467.1 | TR2A62_1737 | TR2A62_0005 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Tungsten-containing formate dehydrogenase beta subunit; Identified by match to protein family HMM PF01512. | 0.973 |
| EET47992.1 | EET49368.1 | TR2A62_1737 | TR2A62_0347 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Conserved hypothetical protein. | 0.974 |
| EET47992.1 | EET49525.1 | TR2A62_1737 | TR2A62_0399 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Hypothetical protein; Identified by Glimmer3; putative. | 0.974 |
| EET47992.1 | EET49673.1 | TR2A62_1737 | TR2A62_1852 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.952 |
| EET47992.1 | dnaK | TR2A62_1737 | TR2A62_2537 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.927 |
| EET47992.1 | gmk | TR2A62_1737 | TR2A62_0695 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.937 |
| EET47992.1 | hrpB | TR2A62_1737 | TR2A62_3402 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | ATP-dependent helicase HrpB; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF08482; match to protein family HMM TIGR01970. | 0.970 |
| EET47992.1 | nuoA | TR2A62_1737 | TR2A62_1188 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | NADH-quinone oxidoreductase subunit a; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.926 |
| EET47992.1 | rpsC | TR2A62_1737 | TR2A62_3078 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.953 |
| EET48059.1 | EET47992.1 | TR2A62_2427 | TR2A62_1737 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | 0.945 |
| EET48059.1 | EET48467.1 | TR2A62_2427 | TR2A62_0005 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Tungsten-containing formate dehydrogenase beta subunit; Identified by match to protein family HMM PF01512. | 0.984 |
| EET48059.1 | EET49368.1 | TR2A62_2427 | TR2A62_0347 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Conserved hypothetical protein. | 0.507 |
| EET48059.1 | EET49525.1 | TR2A62_2427 | TR2A62_0399 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Hypothetical protein; Identified by Glimmer3; putative. | 0.507 |
| EET48059.1 | EET49673.1 | TR2A62_2427 | TR2A62_1852 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.964 |
| EET48059.1 | nuoA | TR2A62_2427 | TR2A62_1188 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | NADH-quinone oxidoreductase subunit a; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.988 |
| EET48467.1 | EET47992.1 | TR2A62_0005 | TR2A62_1737 | Tungsten-containing formate dehydrogenase beta subunit; Identified by match to protein family HMM PF01512. | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | 0.973 |
| EET48467.1 | EET48059.1 | TR2A62_0005 | TR2A62_2427 | Tungsten-containing formate dehydrogenase beta subunit; Identified by match to protein family HMM PF01512. | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.984 |
| EET48467.1 | dnaK | TR2A62_0005 | TR2A62_2537 | Tungsten-containing formate dehydrogenase beta subunit; Identified by match to protein family HMM PF01512. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.470 |
| EET48467.1 | nuoA | TR2A62_0005 | TR2A62_1188 | Tungsten-containing formate dehydrogenase beta subunit; Identified by match to protein family HMM PF01512. | NADH-quinone oxidoreductase subunit a; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.999 |
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