STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET49509.1Type I secretion outer membrane protein, TolC family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844. (457 aa)    
Predicted Functional Partners:
EET49011.1
Type I secretion membrane fusion protein, HlyD family; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843.
 
 0.996
EET49121.1
Multidrug efflux transporter VexE, putative; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.919
EET47552.1
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.919
EET49271.1
Type I secretion membrane fusion protein, HlyD; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843.
 
 0.857
EET47350.1
Acriflavin resistance protein; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.851
EET48427.1
Acriflavin resistance protein; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.851
EET46629.1
Acriflavin resistance protein; Identified by match to protein family HMM PF00873.
  
 0.851
EET47745.1
ABC transporter, membrane spanning protein; Identified by match to protein family HMM PF02687.
  
 
 0.818
EET47215.1
Conserved hypothetical protein.
 
 0.792
EET48555.1
ABC transporter related protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
 0.770
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.