STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46249.1Monooxygenase, FAD-binding. (84 aa)    
Predicted Functional Partners:
EET47245.1
Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
      0.970
EET48707.1
Fatty acid hydroxylase; Identified by match to protein family HMM PF04116.
   
 0.606
EET49487.1
C-5 sterol desaturase; Identified by match to protein family HMM PF04116.
   
 0.606
EET46325.1
Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486.
     
 0.597
EET48332.1
Amino acid adenylation domain protein, putative; Identified by match to protein family HMM PF00975.
   
 0.589
EET47580.1
Cytochrome P450, putative; Identified by match to protein family HMM PF00067.
   
  0.542
EET48752.1
Identified by match to protein family HMM PF00067.
   
  0.542
EET49386.1
Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
   
  0.542
EET46794.1
Putative cytochrome P450 126; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
   
  0.542
EET49142.1
Putative dioxygenase subunit beta YeaX; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
     
 0.539
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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