STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaB4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Identified by match to protein family HMM PF03241; match to protein family HMM TIGR02309. (491 aa)    
Predicted Functional Partners:
EET48285.1
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047; match to protein family HMM PF03965.
 
  
 0.838
EET49139.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding; Identified by match to protein family HMM PF00378; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.753
EET48020.1
Fatty acid oxidation complex subunit alpha; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF01210; match to protein family HMM PF02737.
    
 0.753
hpaD
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR02295.
 
   
 0.737
EET49828.1
Putative flavin reductase like domain protein; Identified by match to protein family HMM PF01613.
 
 
 0.668
EET48196.1
MaoC domain protein; Identified by match to protein family HMM PF01575; match to protein family HMM PF07977.
    
  0.665
EET47782.1
Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.652
hpaH
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Identified by match to protein family HMM PF01689; match to protein family HMM TIGR02312.
 
   
 0.589
EET47456.1
Probable enoyl-CoA hydratase PaaG; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.550
EET48629.1
Flavin reductase domain protein, FMN-binding.
  
 
 0.502
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.