STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46850.1Hypothetical protein; Identified by Glimmer3; putative. (218 aa)    
Predicted Functional Partners:
EET49776.1
Hypothetical protein; Identified by Glimmer3; putative.
      
0.773
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.729
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.569
EET47713.1
Inner membrane lipoprotein YiaD.
       0.550
EET47671.1
Outer membrane chaperone Skp; Identified by match to protein family HMM PF03938.
  
 
 0.518
EET47062.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.513
EET47217.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.513
EET49522.1
OmpA/MotB.
   
 0.509
EET47931.1
Flagellar hook protein FlgE; Identified by match to protein family HMM PF06429; match to protein family HMM TIGR03506.
   
  0.507
EET48232.1
OmpA/MotB domain protein; Identified by match to protein family HMM PF00691.
   
 0.502
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.