STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46269.1Conserved hypothetical protein. (164 aa)    
Predicted Functional Partners:
ribA
GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.860
EET49108.1
Two component transcriptional regulator, winged helix family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
     0.620
xth_2
Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
       0.608
EET49796.1
Peptidase M23B; Identified by match to protein family HMM PF01551.
  
     0.492
EET49443.1
Thioredoxin; Identified by match to protein family HMM PF00085.
       0.477
EET46371.1
Conserved domain protein; Identified by match to protein family HMM PF03966; Belongs to the UPF0434 family.
       0.432
EET49545.1
Peptidase S16, lon domain protein; Identified by match to protein family HMM PF02190.
       0.432
EET49693.1
Identified by match to protein family HMM PF00877.
 
     0.420
EET46682.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02687.
  
     0.411
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.