STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET49307.1Hypothetical protein; Identified by Glimmer3; putative. (48 aa)    
Predicted Functional Partners:
EET47133.1
EpsA; Identified by match to protein family HMM PF02563.
  
 0.992
EET48761.1
Rb146; Identified by match to protein family HMM PF02563.
  
 0.992
EET47308.1
Polysaccharide biosynthesis/export protein; Identified by match to protein family HMM PF02563.
  
 0.992
EET48662.1
Rb144; Identified by match to protein family HMM PF02397.
  
 
 0.960
EET48630.1
Polysaccharide biosynthesis protein CapD; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
 
 0.948
EET47018.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.919
EET46217.1
Succinoglycan biosynthesis transport protein ExoP.
  
 
 0.890
EET47284.1
Conserved hypothetical protein.
  
 
 0.890
EET48467.1
Tungsten-containing formate dehydrogenase beta subunit; Identified by match to protein family HMM PF01512.
     
 0.849
EET49707.1
Serine acetyltransferase 4; Identified by match to protein family HMM PF06426; match to protein family HMM TIGR01172.
  
 
 0.793
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.