STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46702.1Identified by match to protein family HMM PF01547. (400 aa)    
Predicted Functional Partners:
EET47412.1
ABC transporter, fused inner membrane subunit; Identified by match to protein family HMM PF00528.
 
 
 0.964
EET49600.1
CDP-alcohol phosphatidyltransferase; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.962
EET49721.1
Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005.
 
   
 0.951
EET47216.1
Mercuric reductase; Identified by match to protein family HMM PF09335.
 
  
 0.619
EET47405.1
Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02769; match to protein family HMM PF07992; match to protein family HMM TIGR00476; match to protein family HMM TIGR03169.
 
     0.526
EET47056.1
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
       0.508
EET48217.1
Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528.
    
  0.505
EET47451.1
Conserved hypothetical protein.
 
     0.453
EET46653.1
ABC transporter, periplasmic substrate-binding protein.
    
  0.452
xth_1
Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
      0.437
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.