STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET49600.1CDP-alcohol phosphatidyltransferase; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (202 aa)    
Predicted Functional Partners:
EET46702.1
Identified by match to protein family HMM PF01547.
 
     0.962
EET47412.1
ABC transporter, fused inner membrane subunit; Identified by match to protein family HMM PF00528.
 
     0.940
EET49721.1
Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005.
 
     0.936
EET49458.1
Conserved hypothetical protein.
  
    0.798
cdsA_2
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
  
 
  0.742
EET46641.1
UbiA prenyltransferase; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family.
   
  0.684
EET47216.1
Mercuric reductase; Identified by match to protein family HMM PF09335.
 
  
  0.639
EET47696.1
Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.610
pgpA
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
    
 0.554
cdsA_1
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family.
    
 0.552
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.