STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchIMagnesium chelatase ATPase subunit I; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (335 aa)    
Predicted Functional Partners:
bchD
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 0.999
bchM
Magnesium protoporphyrin O-methyltransferase; Identified by match to protein family HMM PF07109; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR02021.
 
 
 0.984
bchH
Magnesium chelatase, H subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02025.
 
 
 0.978
cobN
Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257.
 
 
 0.976
EET46459.1
Putative magnesium chelatase accessory protein; Identified by match to protein family HMM PF00561; match to protein family HMM TIGR03056.
 
    0.953
EET49544.1
Spheroidene monooxygenase.
  
  
 0.933
EET46618.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03653; match to protein family HMM TIGR00701.
     
  0.925
EET48407.1
Geranylgeranyl hydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF07992; match to protein family HMM TIGR02023; match to protein family HMM TIGR02032.
 
  
 0.917
EET46874.1
Bacteriochlorophyll synthase 33 kDa chain; Identified by match to protein family HMM PF01040; match to protein family HMM TIGR01476.
 
  
 0.892
EET46393.1
Phytoene synthase; Identified by match to protein family HMM PF00494.
 
  
 0.891
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.