STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchF2-vinyl bacteriochlorophyllide hydratase; Identified by match to protein family HMM PF07284; match to protein family HMM TIGR02020. (162 aa)    
Predicted Functional Partners:
bchB
Light-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
 
 0.999
bchN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
 
 0.999
EET46874.1
Bacteriochlorophyll synthase 33 kDa chain; Identified by match to protein family HMM PF01040; match to protein family HMM TIGR01476.
 
 
 0.995
bchL
Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
 
 
 0.993
EET46276.1
Chlorophyllide reductase iron protein subunit X; Identified by match to protein family HMM PF00142; match to protein family HMM TIGR02016; Belongs to the NifH/BchL/ChlL family.
 
 
 0.992
bchC
Chlorophyll synthesis pathway, BchC; Identified by match to protein family HMM PF08240; match to protein family HMM TIGR01202.
  
 
 0.988
puhA
Photosynthetic reaction center H subunit; Identified by match to protein family HMM PF03967; match to protein family HMM PF05239; match to protein family HMM TIGR01150.
 
  
 0.987
bchZ
Chlorophyllide reductase subunit Z; Identified by match to protein family HMM PF06710; match to protein family HMM TIGR02014.
  
 
 0.986
bchM
Magnesium protoporphyrin O-methyltransferase; Identified by match to protein family HMM PF07109; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR02021.
 
  
 0.985
bchY
Chlorophyllide reductase subunit Y; Identified by match to protein family HMM TIGR02015.
  
 
 0.981
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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