STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET47743.1Type I secretion target repeat protein. (113 aa)    
Predicted Functional Partners:
EET48778.1
Conserved hypothetical protein.
     0.986
EET47982.1
Conserved hypothetical protein.
  
  0.858
EET47928.1
Type I secretion target repeat protein.
  
  0.854
EET48864.1
Conserved hypothetical protein.
  
  0.847
EET46846.1
Conserved hypothetical protein.
  
  0.843
EET46490.1
Conserved hypothetical protein.
  
  0.800
EET49288.1
Conserved hypothetical protein.
 
  0.799
EET49529.1
Identified by match to protein family HMM PF02485.
  
     0.774
EET48480.1
Type I secretion target repeat protein.
  
     0.764
EET46274.1
Conserved hypothetical protein.
  
     0.758
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.