STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48539.1Conserved hypothetical protein. (233 aa)    
Predicted Functional Partners:
EET49282.1
Lipocalin family protein.
  
     0.591
EET49614.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02466.
       0.548
EET47873.1
Autoinducer synthesis protein.
  
     0.454
EET47869.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.450
EET48859.1
Conserved hypothetical protein.
  
     0.441
EET49177.1
Acyl-homoserine-lactone synthase; Belongs to the autoinducer synthase family.
  
     0.433
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.