STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccrAcrotonyl-CoA reductase; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR01751. (427 aa)    
Predicted Functional Partners:
EET49447.1
methylmalonyl-CoA mutase; Identified by match to protein family HMM PF01642; match to protein family HMM PF02310; match to protein family HMM TIGR00640; match to protein family HMM TIGR00641.
  
 0.962
EET49808.1
MaoC family protein.
  
 0.920
mce
methylmalonyl-CoA epimerase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081.
     
 0.914
EET48196.1
MaoC domain protein; Identified by match to protein family HMM PF01575; match to protein family HMM PF07977.
  
 0.904
EET48332.1
Amino acid adenylation domain protein, putative; Identified by match to protein family HMM PF00975.
  
 
 0.903
EET49745.1
Enoyl-coa hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
  0.860
EET49024.1
isobutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
  0.822
EET46298.1
propionate--CoA ligase; Identified by match to protein family HMM PF00501.
 
 
 
 0.789
EET49139.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding; Identified by match to protein family HMM PF00378; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.720
EET47653.1
Identified by match to protein family HMM PF01553.
       0.690
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.