STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48004.1Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (267 aa)    
Predicted Functional Partners:
EET46903.1
Glutamate/glutamine/aspartate/asparagine transport ATP-binding proteinbztD; Identified by match to protein family HMM PF00005.
  0.998
EET46945.1
Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 
  0.996
EET46468.1
Arginine-binding periplasmic protein 1; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
  0.980
EET48043.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
  
 
0.974
EET46502.1
Glutamate/glutamine/aspartate/asparagine transport ATP-binding proteinbztD; Identified by match to protein family HMM PF00005.
  0.958
EET49437.1
Glutamate/glutamine/aspartate/asparagine transport ATP-binding proteinbztD; Identified by match to protein family HMM PF00005.
  0.956
EET47063.1
Arginine/ornithine transport ATP-binding protein AotP; Identified by match to protein family HMM PF00005.
  0.955
EET47291.1
Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005.
  0.953
EET49352.1
Extracellular solute-binding protein family 3; Identified by match to protein family HMM PF00497.
  0.906
EET49533.1
Prephrenate dehydratase; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 
  0.837
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.