STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46903.1Glutamate/glutamine/aspartate/asparagine transport ATP-binding proteinbztD; Identified by match to protein family HMM PF00005. (247 aa)    
Predicted Functional Partners:
EET48043.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  0.998
EET48004.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  0.998
EET46945.1
Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 
  0.994
EET48821.1
ABC-type amino acid transport system permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  0.982
EET49644.1
Octopine transport system permease protein OccM; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
  0.980
EET47648.1
Glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 0.971
EET48373.1
Glutamine ABC transporter permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  0.941
EET48946.1
Glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.920
EET46834.1
His/Glu/Gln/Arg/opine family ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  0.918
EET49633.1
Glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor; Identified by match to protein family HMM TIGR01096.
 
 0.916
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.