Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EET46322.1 | EET46769.1 | TR2A62_3371 | TR2A62_3367 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.564 |
| EET46322.1 | EET47122.1 | TR2A62_3371 | TR2A62_3370 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00850. | 0.572 |
| EET46322.1 | EET48440.1 | TR2A62_3371 | TR2A62_3369 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00881. | 0.564 |
| EET46325.1 | EET46478.1 | TR2A62_2026 | TR2A62_1102 | Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.599 |
| EET46325.1 | EET48091.1 | TR2A62_2026 | TR2A62_2948 | Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486. | precorrin-3B C17-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466. | 0.491 |
| EET46325.1 | EET48440.1 | TR2A62_2026 | TR2A62_3369 | Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486. | Identified by match to protein family HMM PF00881. | 0.554 |
| EET46325.1 | ribB | TR2A62_2026 | TR2A62_3677 | Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486. | Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.757 |
| EET46478.1 | EET46325.1 | TR2A62_1102 | TR2A62_2026 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486. | 0.599 |
| EET46478.1 | EET48091.1 | TR2A62_1102 | TR2A62_2948 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | precorrin-3B C17-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466. | 0.983 |
| EET46478.1 | EET48440.1 | TR2A62_1102 | TR2A62_3369 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Identified by match to protein family HMM PF00881. | 0.826 |
| EET46478.1 | ribB | TR2A62_1102 | TR2A62_3677 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.439 |
| EET46581.1 | EET48440.1 | TR2A62_0968 | TR2A62_3369 | Peroxisomal-coenzyme A synthetase; Identified by match to protein family HMM PF00501. | Identified by match to protein family HMM PF00881. | 0.525 |
| EET46769.1 | EET46322.1 | TR2A62_3367 | TR2A62_3371 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.564 |
| EET46769.1 | EET47122.1 | TR2A62_3367 | TR2A62_3370 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00850. | 0.608 |
| EET46769.1 | EET48440.1 | TR2A62_3367 | TR2A62_3369 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00881. | 0.883 |
| EET47122.1 | EET46322.1 | TR2A62_3370 | TR2A62_3371 | Identified by match to protein family HMM PF00850. | Conserved hypothetical protein. | 0.572 |
| EET47122.1 | EET46769.1 | TR2A62_3370 | TR2A62_3367 | Identified by match to protein family HMM PF00850. | Conserved hypothetical protein. | 0.608 |
| EET47122.1 | EET48440.1 | TR2A62_3370 | TR2A62_3369 | Identified by match to protein family HMM PF00850. | Identified by match to protein family HMM PF00881. | 0.621 |
| EET48091.1 | EET46325.1 | TR2A62_2948 | TR2A62_2026 | precorrin-3B C17-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466. | Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486. | 0.491 |
| EET48091.1 | EET46478.1 | TR2A62_2948 | TR2A62_1102 | precorrin-3B C17-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.983 |
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