STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET49099.1Conserved hypothetical protein. (92 aa)    
Predicted Functional Partners:
EET47193.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549.
 
     0.879
EET47313.1
Septum formation initiator; Identified by match to protein family HMM PF04977.
  
     0.736
EET47467.1
Response regulator receiver modulated diguanylate cyclase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
       0.729
EET48481.1
Conserved hypothetical protein.
  
     0.542
EET48951.1
Signal transduction histidine kinase regulating citrate/malate metabolism.
  
     0.530
EET46441.1
Conserved hypothetical protein.
  
     0.522
EET48990.1
Identified by match to protein family HMM PF06253; Belongs to the trimethylamine methyltransferase family.
       0.522
EET47053.1
Conserved hypothetical protein.
  
     0.511
EET49772.1
Heme NO binding domain protein; Identified by match to protein family HMM PF07700.
       0.500
EET46760.1
Diguanylate cyclase; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
       0.500
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.