STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET47025.1Amidohydrolase 2; Identified by match to protein family HMM PF04909. (290 aa)    
Predicted Functional Partners:
EET47094.1
3-beta hydroxysteroid dehydrogenase/isomerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370.
    
  0.823
EET46325.1
Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02486.
     
 0.721
EET49142.1
Putative dioxygenase subunit beta YeaX; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
     
 0.721
EET47581.1
Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM PF01113; match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.611
EET49546.1
HpcH/HpaI aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
       0.567
EET47024.1
Oligoendopeptidase, PepF/M3 family; Identified by match to protein family HMM PF01432; match to protein family HMM PF08439; match to protein family HMM TIGR02290.
       0.565
EET49431.1
Mandelate racemase/muconate lactonizing enzyme family protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
 0.560
EET47347.1
ATP dependent DNA ligase; Identified by match to protein family HMM PF01068; match to protein family HMM PF04679.
       0.510
rhaU
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.459
EET47606.1
mRNA 3''''-end processing factor.
       0.448
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.