STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Olsu_0996ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412:IPR013525; KEGG: apv:Apar_0602 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: C2D6A4 ABC-2 type transporter; PFAM: ABC-2 type transporter. (279 aa)    
Predicted Functional Partners:
Olsu_0995
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: apv:Apar_0816 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C8W705 ABC transporter related; PFAM: ABC transporter.
 
 
 0.998
Olsu_0994
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ele:Elen_2037 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: C2D6A6 Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
 
  
 0.775
Olsu_0600
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.586
Olsu_0828
COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR006076:IPR015899:IPR016040:IPR004379; KEGG: apv:Apar_0647 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD dependent oxidoreductase; PRIAM: UDP-galactopyranose mutase; SPTR: B6G9J4 Putative uncharacterized protein; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase; FAD dependent oxidoreductase; TIGRFAM: UDP-galactopyranose mutase.
  
  
 0.580
Olsu_1740
KEGG: ccu:Ccur_01130 hypothetical protein; SPTR: C4FAL0 Putative uncharacterized protein.
  
  
 0.536
Olsu_0596
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ele:Elen_2054 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: C4F928 Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
 
  
 0.508
Olsu_1346
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterProIPR000515:IPR010065:IPR018313:IPR001638:IPR 001320; KEGG: apv:Apar_0430 polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: A4E9B3 Putative uncharacterized protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFA [...]
    
 0.430
Olsu_0829
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: apv:Apar_0648 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: C8WAE0 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
 
  
 0.429
pyrR
Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
  
    0.427
pyrB
COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006130:IPR002082:IPR006132:IPR006131; KEGG: apv:Apar_0814 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: C2D6B0 Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate ca [...]
       0.408
Your Current Organism:
Olsenella uli
NCBI taxonomy Id: 633147
Other names: O. uli DSM 7084, Olsenella uli ATCC 49627, Olsenella uli DSM 7084, Olsenella uli str. DSM 7084, Olsenella uli strain DSM 7084
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