STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Olsu_1302COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: apv:Apar_0939 virulence factor MviN family protein; PFAM: virulence factor MVIN family protein; SPTR: C2D6J7 MVF family virulence factor transporter; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN. (604 aa)    
Predicted Functional Partners:
Olsu_1754
COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: apv:Apar_1341 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C2D9G8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2662); FHA domain.
  
 
 
 0.964
Olsu_1757
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001182:IPR005311:IPR001460:IPR012338; KEGG: apv:Apar_1344 peptidoglycan glycosyltransferase; PFAM: cell cycle protein; Penicillin-binding protein dimerisation domain; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: C2D9H1 Putative uncharacterized protein; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; Cell cycle protein; Belongs to the SEDS family.
 
  
 0.818
Olsu_1755
COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: apv:Apar_1342 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C8W8H5 FHA domain containing protein; PFAM: FHA domain.
  
 
 
 0.725
Olsu_1114
KEGG: apv:Apar_0469 hypothetical protein; SPTR: C8W9W2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322).
  
     0.654
Olsu_0940
COGs: COG1716 FOG: FHA domain; InterPro IPR008984:IPR000253; KEGG: apv:Apar_0753 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C2D6H2 FHA domain protein; PFAM: FHA domain.
  
 
 
 0.643
Olsu_1303
ybaK/ebsC protein; COGs: COG2606 conserved hypothetical protein; InterPro IPR007214:IPR004369; KEGG: apv:Apar_0940 YbaK/EbsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: C8W7C9 YbaK/ebsC protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.630
Olsu_0956
InterPro IPR003594; KEGG: apv:Apar_0776 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; SPTR: B9CKH7 Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.623
Olsu_1563
InterPro IPR002477; KEGG: apv:Apar_0344 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan-binding domain 1 protein; SPTR: C2D948 Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain.
 
   
 0.618
Olsu_1095
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
   
 0.611
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.611
Your Current Organism:
Olsenella uli
NCBI taxonomy Id: 633147
Other names: O. uli DSM 7084, Olsenella uli ATCC 49627, Olsenella uli DSM 7084, Olsenella uli str. DSM 7084, Olsenella uli strain DSM 7084
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