STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagg_0080Hypothetical protein; SPTR: B8D5E1 Putative uncharacterized protein. (115 aa)    
Predicted Functional Partners:
atpB
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
 0.999
atpA
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
  
 0.999
atpE
H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.999
Tagg_0083
Hypothetical protein; SPTR: B8D5D8 V-type ATPase, subunit K; PFAM: ATP synthase subunit C.
  
 0.999
Tagg_0084
V-type ATPase 116 kDa subunit; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: gur:Gura_0418 H(+)-transporting two-sector ATPase; PFAM: V-type ATPase 116 kDa subunit; SPTR: B8D5D7 V-type ATPase, 116 kDa subunit I; PFAM: V-type ATPase 116kDa subunit family.
  
 0.999
Tagg_0087
COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699:IPR018483; KEGG: similar to vacuolar proton pump delta polypeptide; K02149 V-type H+-transporting ATPase subunit D; PFAM: H+transporting two-sector ATPase D subunit; SPTR: A3DNR4 V-type ATPase, D subunit; TIGRFAM: V-type ATPase, D subunit; PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D.
  
 0.999
Tagg_0081
Hypothetical protein; SPTR: B8D5E0 Putative uncharacterized protein.
       0.825
Tagg_0064
InterPro IPR000326:IPR001917; KEGG: rfe:RF_0886 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: B8D5F6 Phosphoesterase, PA-phosphatase related; PFAM: PAP2 superfamily.
  
 
 0.805
Tagg_1026
NADH dehydrogenase (ubiquinone) 30 kDa subunit; COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR001268:IPR006137; KEGG: ndhK; NADH dehydrogenase 27 kDa subunit; K05582 NADH dehydrogenase I subunit K; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: B8D5A0 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; Respiratory-chain NADH dehydrogenase, 30 Kd subunit.
   
  
 0.744
Tagg_0141
Protein of unknown function ATP binding protein; COGs: COG1100 GTPase SAR1 and related small G protein; InterPro IPR004130; KEGG: hypothetical protein; K06883; PFAM: protein of unknown function ATP binding; SPTR: B8D437 Predicted ATP binding protein; PFAM: Conserved hypothetical ATP binding protein.
   
 
  0.637
Your Current Organism:
Thermosphaera aggregans
NCBI taxonomy Id: 633148
Other names: T. aggregans DSM 11486, Thermosphaera aggregans DSM 11486, Thermosphaera aggregans M11TL, Thermosphaera aggregans str. DSM 11486, Thermosphaera aggregans strain DSM 11486
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.