STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagg_0177KEGG: hypothetical protein; SPTR: B8D2W1 Putative uncharacterized protein. (274 aa)    
Predicted Functional Partners:
Tagg_0178
AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR007330:IPR003959:IPR003593; KEGG: hypothetical protein similar to suppressor protein of bem1/bed5 double mutants; K12196 vacuolar protein-sorting-associated protein 4; PFAM: AAA ATPase central domain protein; MIT domain protein; SMART: AAA ATPase; MIT domain protein; SPTR: B8D2W2 AAA family ATPase; PFAM: ATPase family associated with various cellular activities (AAA); MIT (microtubule interacting and transport) domain.
   
 0.964
Tagg_0176
Hypothetical protein; KEGG: Kinesin motor domain containing protein; SPTR: B8D577 Putative uncharacterized protein.
   
 
 0.916
Tagg_0989
AAA family ATPase, CDC48 subfamily; COGs: COG0464 ATPase of the AAA+ class; InterProIPR004201:IPR003959:IPR011704:IPR003338:IPR 003593:IPR003960:IPR005938; KEGG: gur:Gura_2842 AAA family ATPase, CDC48 subfamily protein; PFAM: AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; ATPase associated with various cellular activities AAA_5; AAA ATPase VAT domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: B8D5L5 AAA family ATPase, CDC48 subfamily; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: ATPase family associated with various cellular [...]
   
 0.828
Tagg_1189
AAA family ATPase, CDC48 subfamily; COGs: COG0464 ATPase of the AAA+ class; InterProIPR004201:IPR003959:IPR011704:IPR003338:IPR 003593:IPR003960:IPR005938; KEGG: gur:Gura_2842 AAA family ATPase, CDC48 subfamily protein; PFAM: AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; ATPase associated with various cellular activities AAA_5; AAA ATPase VAT domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: B8D3A0 Cell division control protein 48, AAA family; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: Cell division protein 48 (CDC48), N- [...]
   
 0.828
Your Current Organism:
Thermosphaera aggregans
NCBI taxonomy Id: 633148
Other names: T. aggregans DSM 11486, Thermosphaera aggregans DSM 11486, Thermosphaera aggregans M11TL, Thermosphaera aggregans str. DSM 11486, Thermosphaera aggregans strain DSM 11486
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.