STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagg_0353Sigma 54 interacting domain protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593:IPR002078:IPR017871; KEGG: hha:Hhal_0379 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8D4P7 ABC transporter related; PFAM: ABC transporter. (430 aa)    
Predicted Functional Partners:
Tagg_0460
Cobalt transport protein; InterPro IPR003339; KEGG: glo:Glov_2768 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; SPTR: B8D2R6 Cobalt transport protein; PFAM: Cobalt transport protein.
 
 
 0.937
Tagg_0354
Hypothetical protein; SPTR: B8D4P8 Putative uncharacterized protein.
       0.783
Tagg_0352
InterPro IPR009825; PFAM: protein of unknown function DUF1393; SPTR: A3DKY9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1393).
 
  
 0.776
Tagg_0291
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR013563:IPR003439:IPR003593:IPR010066; KEGG: gsu:GSU2623 peptide ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: B8D313 Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region.
 
  
0.704
Tagg_0442
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593:IPR017871; KEGG: hha:Hhal_0379 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8D2K6 ABC transporter related; PFAM: ABC transporter.
 
 
0.700
Tagg_0280
ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: gur:Gura_2760 cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A3DLJ2 ABC transporter related; PFAM: ABC transporter.
 
 
0.685
Tagg_0698
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR013563:IPR003439:IPR003593:IPR017871:IPR 010066; KEGG: scl:sce4299 peptide ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: B8D3N7 Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM [...]
  
  
0.679
Tagg_0954
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR013563:IPR003439:IPR003593:IPR017871:IPR 010066; KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: B1L481 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide [...]
  
  
0.679
Tagg_1116
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR013563:IPR003439:IPR003593:IPR010066; KEGG: ara:Arad_9453 oligopeptide ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Q9V054 AppF-2 oligopeptide transport ATP-binding protein appF; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide [...]
  
  
0.679
Tagg_0461
COGs: COG4721 membrane protein; InterPro IPR017195; PFAM: ABC-type thiamin-related transport system, permease component 1, predicted; SPTR: B8D6R0 ABC transporter, permease protein; PFAM: ABC-type cobalt transport system, permease component.
 
  
 0.668
Your Current Organism:
Thermosphaera aggregans
NCBI taxonomy Id: 633148
Other names: T. aggregans DSM 11486, Thermosphaera aggregans DSM 11486, Thermosphaera aggregans M11TL, Thermosphaera aggregans str. DSM 11486, Thermosphaera aggregans strain DSM 11486
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.