STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagg_0643Alpha-amylase; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: lip:LI0331 alpha-amylase; PFAM: glycoside hydrolase family 57; PRIAM: Alpha-amylase; SPTR: B8D3J5 Alpha-amylase; PFAM: Glycosyl hydrolase family 57. (519 aa)    
Predicted Functional Partners:
Tagg_0642
4-alpha-glucanotransferase; InterPro IPR015178:IPR004300:IPR015179:IPR018483; KEGG: mfa:Mfla_1370 4-alpha-glucanotransferase; PFAM: Domain of unknown function DUF1925; glycoside hydrolase family 57; Domain of unknown function DUF1926; PRIAM: 4-alpha-glucanotransferase; SPTR: B8D3J6 Glycoside hydrolase, family 57; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926).
    
  0.981
Tagg_0644
Aminoglycoside phosphotransferase; COGs: COG3281 Uncharacterized protein probably involved in trehalose biosynthesis; InterPro IPR002575; KEGG: gem:GM21_0117 trehalose synthase; PFAM: aminoglycoside phosphotransferase; SPTR: B8D3J4 Alpha amylase.
    
  0.971
Tagg_0299
Glycosyl transferase group 1; COGs: COG0058 Glucan phosphorylase; InterPro IPR001296; KEGG: mes:Meso_2234 alpha-glucan phosphorylases; PFAM: glycosyl transferase group 1; SPTR: B8D2W8 Glycosyl transferase; PFAM: Glycosyl transferases group 1; TIGRFAM: alpha-glucan phosphorylases.
 
 
 0.970
Tagg_0445
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: ecr:ECIAI1_1931 neopullulanase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Q5JID9 Pullulanase type II, GH13 family; PFAM: Alpha amylase, catalytic domain.
    
 0.920
Tagg_0897
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: vfm:VFMJ11_2152 neopullulanase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: A3DM60 Alpha amylase, catalytic region; PFAM: Alpha amylase, catalytic domain.
    
 0.920
Tagg_0641
COGs: COG0297 Glycogen synthase; InterPro IPR001296:IPR013534; KEGG: bph:Bphy_5336 glycogen synthase; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; SPTR: B8D3J7 Glycosyl transferase, group 1; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.
 
  
 0.875
Tagg_0640
Glycoside hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: gem:GM21_3464 glycoside hydrolase family 57; PFAM: glycoside hydrolase family 57; SPTR: B8D3J8 Glycoside hydrolase, family 57; PFAM: Glycosyl hydrolase family 57.
 
   
 0.817
Tagg_0645
InterPro IPR000551; PFAM: regulatory protein MerR; SPTR: A3DPB8 Regulatory protein, MarR; PFAM: DeoR-like helix-turn-helix domain.
       0.661
Tagg_0646
ABC-2 type transporter; COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR013525; KEGG: abu:Abu_1365 ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: B8D3J2 ABC-2 type transporter.
       0.536
Tagg_0647
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: mxa:MXAN_6827 sodium ABC transporter ATP-binding protein NatA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8D3J1 Daunorubicin resistance ATP-binding protein-like protein; PFAM: ABC transporter.
       0.535
Your Current Organism:
Thermosphaera aggregans
NCBI taxonomy Id: 633148
Other names: T. aggregans DSM 11486, Thermosphaera aggregans DSM 11486, Thermosphaera aggregans M11TL, Thermosphaera aggregans str. DSM 11486, Thermosphaera aggregans strain DSM 11486
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