STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagg_0837Protein of unknown function DUF87; COGs: COG0433 ATPase; InterPro IPR002789:IPR003593:IPR016160; KEGG: bph:Bphy_0246 hypothetical protein; PFAM: protein of unknown function DUF87; SMART: AAA ATPase; SPTR: A3DN93 AAA ATPase; PFAM: Domain of unknown function DUF87. (599 aa)    
Predicted Functional Partners:
Tagg_0836
KEGG: hypothetical protein LOC100025479; SPTR: B8D5X6 YL1 domain containing protein.
       0.755
Tagg_0265
Hypothetical protein; PFAM: NurA domain.
   
 
 0.630
Tagg_0814
NurA domain protein; COGs: COG1630 conserved hypothetical protein; InterPro IPR018977; PFAM: NurA domain; SPTR: Q9YFZ2 5' to 3' nuclease repair protein NurA; PFAM: NurA domain.
   
 
 0.630
Tagg_0838
DEAD/DEAH box helicase domain protein; COGs: COG1201 Lhr-like helicase; InterProIPR020441:IPR001650:IPR011545:IPR006935:IPR 013701:IPR014001:IPR014021; KEGG: mca:MCA1579 DEAD-box ATP dependent DNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; DEAD/H associated domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: B8D5X5 DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase.
       0.596
Your Current Organism:
Thermosphaera aggregans
NCBI taxonomy Id: 633148
Other names: T. aggregans DSM 11486, Thermosphaera aggregans DSM 11486, Thermosphaera aggregans M11TL, Thermosphaera aggregans str. DSM 11486, Thermosphaera aggregans strain DSM 11486
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.