STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagg_1212Small GTP-binding protein; COGs: COG0370 Fe2+ transport system protein B; InterProIPR006073:IPR011642:IPR013684:IPR002917:IPR 011619:IPR005225; KEGG: sat:SYN_02208 Fe2+ transport system protein B; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Miro domain protein; Ferrous iron transport protein B domain protein; SPTR: A3DPV4 Small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: Ferrous iron transport protein B; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain. (689 aa)    
Predicted Functional Partners:
Tagg_1213
FeoA family protein; InterPro IPR007167; KEGG: dal:Dalk_1640 ferric uptake regulator, Fur family; PFAM: FeoA family protein; SPTR: A3DPV3 FeoA family protein; PFAM: FeoA domain.
  
  
 0.991
Tagg_1214
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: A9SF17 Predicted protein; PFAM: alpha/beta hydrolase fold.
   
   0.669
Tagg_1238
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR001757:IPR001756:IPR006121:IPR008250:IPR 005834:IPR018303:IPR017969:IPR000150:IPR006403:IPR006416; KEGG: oan:Oant_3240 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A3MU36 Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; [...]
  
 
 0.613
Tagg_1215
Hypothetical protein; SPTR: A3DN61 Putative uncharacterized protein.
       0.545
Tagg_1216
COGs: COG4920 membrane protein; SPTR: B8D618 Hypothetical membrane protein; PFAM: Predicted membrane protein (DUF2208).
       0.545
Tagg_1077
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cjd:JJD26997_1969 putative hemin ABC transporter, permease protein; PFAM: transport system permease protein; SPTR: A3DLV5 Transport system permease protein; PFAM: FecCD transport family.
  
 
 0.519
Tagg_1307
FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003395:IPR003439:IPR003593:IPR010230; KEGG: tmz:Tmz1t_1898 FeS assembly ATPase SufC; PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; SPTR: B8D365 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: FeS assembly ATPase SufC.
     
 0.482
Tagg_0283
COGs: COG1528 Ferritin-like protein; InterPro IPR008331:IPR009040; KEGG: dvm:DvMF_0183 ferroxidase; PFAM: Ferritin Dps family protein; SPTR: B8D305 Ferritin, Dps family protein; PFAM: Ferritin-like domain.
     
 0.470
Tagg_1078
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491:IPR001226; KEGG: ajs:Ajs_1099 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: A3DLV6 Periplasmic binding protein; PFAM: Periplasmic binding protein.
  
  
 0.463
Tagg_0083
Hypothetical protein; SPTR: B8D5D8 V-type ATPase, subunit K; PFAM: ATP synthase subunit C.
 
 
 
 0.438
Your Current Organism:
Thermosphaera aggregans
NCBI taxonomy Id: 633148
Other names: T. aggregans DSM 11486, Thermosphaera aggregans DSM 11486, Thermosphaera aggregans M11TL, Thermosphaera aggregans str. DSM 11486, Thermosphaera aggregans strain DSM 11486
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