STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagg_1355InterPro IPR004365; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; SPTR: B6YTU1 Putative uncharacterized protein. (678 aa)    
Predicted Functional Partners:
Tagg_1356
Protein of unknown function DUF112 transmembrane; COGs: COG1784 membrane protein; InterPro IPR002823; KEGG: bbr:BB0377 hypothetical protein; PFAM: protein of unknown function DUF112 transmembrane; SPTR: B7R3H3 Integral membrane protein; PFAM: Tripartite tricarboxylate transporter TctA family.
       0.789
Tagg_1357
SPTR: B6YTT9 Hypothetical membrane protein; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457).
       0.789
Tagg_1358
KEGG: tbd:Tbd_1205 DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase; SPTR: B1L3X0 Putative uncharacterized protein; Unusual start codon.
       0.490
Tagg_1359
Hypothetical protein.
       0.490
Your Current Organism:
Thermosphaera aggregans
NCBI taxonomy Id: 633148
Other names: T. aggregans DSM 11486, Thermosphaera aggregans DSM 11486, Thermosphaera aggregans M11TL, Thermosphaera aggregans str. DSM 11486, Thermosphaera aggregans strain DSM 11486
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.