STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL00974.1PFAM: copper resistance B precursor; KEGG: pzu:PHZ_c1477 copper resistance B precursor. (380 aa)    
Predicted Functional Partners:
ADL00975.1
Copper-resistance protein, CopA family; KEGG: mea:Mex_p20030 copper resistance protein CopA; TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; multicopper oxidase type 1.
 
  
 0.996
ADL00973.1
PFAM: copper resistance protein CopC; KEGG: sdn:Sden_3544 copper resistance protein CopC.
     
 0.780
ADL00972.1
KEGG: bps:BPSL0435 ammonium transporter family protein.
       0.726
ADL00977.1
KEGG: pzu:PHZ_c1474 hypothetical protein.
 
     0.700
ADL00981.1
TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pzu:PHZ_c1055 heavy-metal transporting P-type ATPase; SMART: TRASH domain protein.
 
   
 0.666
ADL00979.1
KEGG: pzu:PHZ_p0224 copper resistance d transmembrane protein.
 
   
 0.627
ADL00980.1
PFAM: copper resistance protein CopC; KEGG: cak:Caul_2347 copper resistance protein CopC.
 
   
 0.556
ADL00976.1
KEGG: pzu:PHZ_c1475 RNA polymerase sigma-70 factor,ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
       0.495
ADL00978.1
KEGG: hypothetical protein.
       0.491
ADL00961.1
PFAM: outer membrane efflux protein; KEGG: tgr:Tgr7_2803 outer membrane efflux protein.
 
   
 0.465
Your Current Organism:
Brevundimonas subvibrioides
NCBI taxonomy Id: 633149
Other names: B. subvibrioides ATCC 15264, Brevundimonas subvibrioides ATCC 15264, Brevundimonas subvibrioides CB81, Brevundimonas subvibrioides DSM 4735, Brevundimonas subvibrioides LMG 14903, Brevundimonas subvibrioides str. ATCC 15264, Brevundimonas subvibrioides strain ATCC 15264
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