STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL01661.1KEGG: pzu:PHZ_c2900 hypothetical protein. (155 aa)    
Predicted Functional Partners:
lysS
Lysine--tRNA ligase; KEGG: cak:Caul_0137 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.620
ADL01662.1
KEGG: mmr:Mmar10_1015 hypothetical protein.
       0.603
ADL01663.1
KEGG: syp:SYNPCC7002_A0462 hypothetical protein.
       0.603
ADL01659.1
KEGG: cak:Caul_1062 SH3 type 3 domain-containing protein; PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein.
       0.429
Your Current Organism:
Brevundimonas subvibrioides
NCBI taxonomy Id: 633149
Other names: B. subvibrioides ATCC 15264, Brevundimonas subvibrioides ATCC 15264, Brevundimonas subvibrioides CB81, Brevundimonas subvibrioides DSM 4735, Brevundimonas subvibrioides LMG 14903, Brevundimonas subvibrioides str. ATCC 15264, Brevundimonas subvibrioides strain ATCC 15264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.