Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADL02306.1PFAM: cytochrome c class I; KEGG: hne:HNE_2402 cytochrome c family protein. (134 aa)    
Predicted Functional Partners:
ADL01988.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.931
ADL00120.1
KEGG: pzu:PHZ_c0546 cytochrome c oxidase, subunit III; PFAM: cytochrome c oxidase subunit III.
  
 
 0.906
ADL01987.1
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.892
ADL01406.1
KEGG: pzu:PHZ_c2813 cytochrome c oxidase, CcoO subunit; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO.
  
 
 0.865
ADL01405.1
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; KEGG: pzu:PHZ_c2814 cytochrome c oxidase, CcoN subunit; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.844
ADL01407.1
KEGG: pzu:PHZ_c2812 cytochrome c oxidase, CcoQ subunit.
 
 
 0.831
ADL01986.1
PFAM: cytochrome c1; KEGG: ccs:CCNA_00507 cytochrome c1.
  
 
 0.793
ADL00056.1
PFAM: cytochrome c class I; KEGG: mrd:Mrad2831_2618 cytochrome c class I.
 
 
0.755
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.747
ADK99555.1
KEGG: met:M446_4937 hypothetical protein.
  
     0.736
Your Current Organism:
Brevundimonas subvibrioides
NCBI taxonomy Id: 633149
Other names: B. subvibrioides ATCC 15264, Brevundimonas subvibrioides ATCC 15264, Brevundimonas subvibrioides CB81, Brevundimonas subvibrioides DSM 4735, Brevundimonas subvibrioides LMG 14903, Brevundimonas subvibrioides str. ATCC 15264, Brevundimonas subvibrioides strain ATCC 15264
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