STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS52801.1Protein of unknown function. (105 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase.
       0.841
SIS52768.1
Hypothetical protein.
       0.773
SIS52784.1
Hypothetical protein.
       0.773
SIS52742.1
Thiol-disulfide isomerase or thioredoxin.
       0.656
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.642
SIS84875.1
Hypothetical protein.
  
     0.592
SIS52837.1
TIGR02302 family protein.
       0.561
SIS54694.1
Hypothetical protein.
  
     0.483
SIS54347.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.448
SIS83763.1
Uncharacterized conserved protein, MAPEG superfamily.
 
     0.435
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.