Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS56808.1 | SIS56824.1 | SAMN05421759_101472 | SAMN05421759_101473 | Dienelactone hydrolase family protein. | Dienelactone hydrolase family protein. | 0.994 |
SIS56808.1 | SIS56844.1 | SAMN05421759_101472 | SAMN05421759_101474 | Dienelactone hydrolase family protein. | Hypothetical protein. | 0.559 |
SIS56808.1 | SIS94447.1 | SAMN05421759_101472 | SAMN05421759_10757 | Dienelactone hydrolase family protein. | Hypothetical protein. | 0.672 |
SIS56808.1 | SIT09461.1 | SAMN05421759_101472 | SAMN05421759_11548 | Dienelactone hydrolase family protein. | L-alanine-DL-glutamate epimerase. | 0.659 |
SIS56808.1 | gcvP | SAMN05421759_101472 | SAMN05421759_102411 | Dienelactone hydrolase family protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.471 |
SIS56824.1 | SIS56808.1 | SAMN05421759_101473 | SAMN05421759_101472 | Dienelactone hydrolase family protein. | Dienelactone hydrolase family protein. | 0.994 |
SIS56824.1 | SIS56844.1 | SAMN05421759_101473 | SAMN05421759_101474 | Dienelactone hydrolase family protein. | Hypothetical protein. | 0.549 |
SIS56824.1 | SIS94447.1 | SAMN05421759_101473 | SAMN05421759_10757 | Dienelactone hydrolase family protein. | Hypothetical protein. | 0.672 |
SIS56824.1 | SIT09461.1 | SAMN05421759_101473 | SAMN05421759_11548 | Dienelactone hydrolase family protein. | L-alanine-DL-glutamate epimerase. | 0.659 |
SIS56824.1 | gcvP | SAMN05421759_101473 | SAMN05421759_102411 | Dienelactone hydrolase family protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.471 |
SIS56844.1 | SIS56808.1 | SAMN05421759_101474 | SAMN05421759_101472 | Hypothetical protein. | Dienelactone hydrolase family protein. | 0.559 |
SIS56844.1 | SIS56824.1 | SAMN05421759_101474 | SAMN05421759_101473 | Hypothetical protein. | Dienelactone hydrolase family protein. | 0.549 |
SIS94447.1 | SIS56808.1 | SAMN05421759_10757 | SAMN05421759_101472 | Hypothetical protein. | Dienelactone hydrolase family protein. | 0.672 |
SIS94447.1 | SIS56824.1 | SAMN05421759_10757 | SAMN05421759_101473 | Hypothetical protein. | Dienelactone hydrolase family protein. | 0.672 |
SIT09461.1 | SIS56808.1 | SAMN05421759_11548 | SAMN05421759_101472 | L-alanine-DL-glutamate epimerase. | Dienelactone hydrolase family protein. | 0.659 |
SIT09461.1 | SIS56824.1 | SAMN05421759_11548 | SAMN05421759_101473 | L-alanine-DL-glutamate epimerase. | Dienelactone hydrolase family protein. | 0.659 |
gcvP | SIS56808.1 | SAMN05421759_102411 | SAMN05421759_101472 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Dienelactone hydrolase family protein. | 0.471 |
gcvP | SIS56824.1 | SAMN05421759_102411 | SAMN05421759_101473 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Dienelactone hydrolase family protein. | 0.471 |