STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS65735.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
SIS65720.1
Alkane 1-monooxygenase.
       0.693
SIS78751.1
Hypothetical protein.
  
     0.676
SIS65601.1
Hypothetical protein.
  
     0.589
SIT16129.1
Hypothetical protein.
  
     0.578
SIT03570.1
Sporulation related domain-containing protein.
  
     0.550
SIS55754.1
Serine/threonine-protein kinase RsbW.
  
     0.548
SIS95349.1
Hypothetical protein.
  
     0.538
SIS60343.1
Hypothetical protein.
  
     0.533
SIT14846.1
PAS domain-containing protein.
  
     0.521
SIS77615.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
     0.518
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.