STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS66576.1Methyl-accepting chemotaxis protein. (563 aa)    
Predicted Functional Partners:
SIS88655.1
Purine-binding chemotaxis protein CheW.
 
 0.999
SIS88665.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.999
SIS88646.1
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 0.990
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.971
SIS88634.1
Two-component system, chemotaxis family, response regulator CheY.
 
  
 0.966
SIS88677.1
Two-component system, chemotaxis family, response regulator CheY.
 
 0.964
SIS75655.1
PAS/PAC sensor hybrid histidine kinase.
 0.945
SIS71326.1
Hypothetical protein.
  
 0.929
SIT03071.1
Signal transduction histidine kinase.
  
 0.929
SIT14289.1
GAF domain-containing protein.
   
 0.880
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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