Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS65216.1 | SIS67223.1 | SAMN05421759_10278 | SAMN05421759_102241 | Methyltransferase domain-containing protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.415 |
SIS65216.1 | SIS67230.1 | SAMN05421759_10278 | SAMN05421759_102242 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.450 |
SIS67204.1 | SIS67211.1 | SAMN05421759_102239 | SAMN05421759_102240 | Hypothetical protein. | Uncharacterized conserved protein. | 0.427 |
SIS67204.1 | SIS67223.1 | SAMN05421759_102239 | SAMN05421759_102241 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.427 |
SIS67211.1 | SIS67204.1 | SAMN05421759_102240 | SAMN05421759_102239 | Uncharacterized conserved protein. | Hypothetical protein. | 0.427 |
SIS67211.1 | SIS67223.1 | SAMN05421759_102240 | SAMN05421759_102241 | Uncharacterized conserved protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.951 |
SIS67211.1 | SIS67230.1 | SAMN05421759_102240 | SAMN05421759_102242 | Uncharacterized conserved protein. | Hypothetical protein. | 0.706 |
SIS67211.1 | SIS84233.1 | SAMN05421759_102240 | SAMN05421759_104229 | Uncharacterized conserved protein. | Transcriptional regulator, ArsR family. | 0.504 |
SIS67211.1 | SIT02043.1 | SAMN05421759_102240 | SAMN05421759_11074 | Uncharacterized conserved protein. | Transcriptional regulator, XRE family. | 0.495 |
SIS67223.1 | SIS65216.1 | SAMN05421759_102241 | SAMN05421759_10278 | RNA polymerase sigma-70 factor, ECF subfamily. | Methyltransferase domain-containing protein. | 0.415 |
SIS67223.1 | SIS67204.1 | SAMN05421759_102241 | SAMN05421759_102239 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.427 |
SIS67223.1 | SIS67211.1 | SAMN05421759_102241 | SAMN05421759_102240 | RNA polymerase sigma-70 factor, ECF subfamily. | Uncharacterized conserved protein. | 0.951 |
SIS67223.1 | SIS67230.1 | SAMN05421759_102241 | SAMN05421759_102242 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.706 |
SIS67223.1 | SIS84233.1 | SAMN05421759_102241 | SAMN05421759_104229 | RNA polymerase sigma-70 factor, ECF subfamily. | Transcriptional regulator, ArsR family. | 0.592 |
SIS67223.1 | SIS96946.1 | SAMN05421759_102241 | SAMN05421759_10831 | RNA polymerase sigma-70 factor, ECF subfamily. | Transcriptional regulator, HxlR family. | 0.494 |
SIS67223.1 | SIT02043.1 | SAMN05421759_102241 | SAMN05421759_11074 | RNA polymerase sigma-70 factor, ECF subfamily. | Transcriptional regulator, XRE family. | 0.510 |
SIS67223.1 | SIT11551.1 | SAMN05421759_102241 | SAMN05421759_11740 | RNA polymerase sigma-70 factor, ECF subfamily. | Calcineurin-like phosphoesterase. | 0.428 |
SIS67223.1 | SIT16401.1 | SAMN05421759_102241 | SAMN05421759_1243 | RNA polymerase sigma-70 factor, ECF subfamily. | Transcriptional regulator, AraC family. | 0.473 |
SIS67230.1 | SIS65216.1 | SAMN05421759_102242 | SAMN05421759_10278 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.450 |
SIS67230.1 | SIS67211.1 | SAMN05421759_102242 | SAMN05421759_102240 | Hypothetical protein. | Uncharacterized conserved protein. | 0.706 |
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