STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS72789.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (349 aa)    
Predicted Functional Partners:
SIS72745.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.948
SIS72756.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.935
SIS72773.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.906
SIT05367.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.900
SIT00328.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.885
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  0.880
SIT05357.1
Multiple sugar transport system permease protein.
  
  0.876
SIS88401.1
ATP-binding cassette, subfamily B.
 
     
0.843
SIS89298.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.831
SIS54016.1
ABC-2 type transport system ATP-binding protein.
 
   
 
0.818
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.