STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS77184.1Hypothetical protein. (465 aa)    
Predicted Functional Partners:
SIS77199.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
       0.659
SIS77213.1
propionyl-CoA carboxylase carboxyltransferase subunit.
     
 0.652
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.569
SIT13274.1
2-methylcitrate dehydratase PrpD.
  
  
 0.514
SIS88062.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.463
SIT11290.1
Hypothetical protein.
     
 0.463
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
   
 0.433
SIS70206.1
3-methylcrotonyl-CoA carboxylase beta subunit.
     
 0.428
SIS72905.1
Serine/threonine-protein kinase HipA.
  
 
 0.422
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.