STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS77213.1propionyl-CoA carboxylase carboxyltransferase subunit. (510 aa)    
Predicted Functional Partners:
SIS70221.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
 
 0.999
SIS77278.1
Biotin carboxyl carrier protein /biotin carboxylase.
 0.999
SIS85638.1
methylmalonyl-CoA epimerase /ethylmalonyl-CoA epimerase.
 
 
 0.981
SIT15739.1
Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.942
SIS97604.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.919
SIS53454.1
Acyl transferase domain-containing protein.
  
 
 0.882
SIT09095.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.873
SIS77318.1
methylmalonyl-CoA mutase.
 
   
 0.857
SIS64897.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.826
SIT11338.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.826
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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