STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS76038.1Transcriptional regulator, TetR family. (199 aa)    
Predicted Functional Partners:
SIS76058.1
acyl-CoA thioesterase.
 
     0.889
SIS76049.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
     0.829
SIS76018.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
  
 0.483
SIS76073.1
Sarcosine oxidase subunit gamma.
       0.443
SIS76091.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
       0.430
SIS76104.1
Sarcosine oxidase subunit delta.
       0.430
SIS76120.1
Sarcosine oxidase subunit beta.
       0.425
SIS76030.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
  
 0.402
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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