STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS81500.1Protein of unknown function. (358 aa)    
Predicted Functional Partners:
SIS81512.1
Peptidase family M48.
 
     0.950
parC
DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
       0.611
SIS99967.1
Hypothetical protein.
  
     0.500
SIS91258.1
Hypothetical protein.
  
     0.495
SIT13121.1
Cytochrome P460.
  
     0.464
SIS81521.1
Electron transfer flavoprotein beta subunit.
       0.460
SIS81531.1
Electron transfer flavoprotein alpha subunit apoprotein.
       0.460
SIS82374.1
ATP-binding cassette, subfamily C, LapB.
  
     0.432
SIT12464.1
Sulfotransferase family protein.
  
     0.429
SIS82386.1
Outer membrane protein, adhesin transport system.
  
     0.412
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.