SIS87588.1 protein (Roseivivax lentus) - STRING interaction network

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Score

SIS87588.1

Uncharacterized ACR, COG1399. (189 aa)

Predicted Functional Partners:

rpsC

0.977

rpmF

0.963

rpsP

0.885

rplK

0.878

rplJ

0.864

trmD

0.863

rimM

0.862

rplA

0.861

rpsF

0.858

infC

0.857

Your Current Organism:

Roseivivax lentus

NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SIS87588.1	infC	SAMN05421759_10527	SAMN05421759_102533	Uncharacterized ACR, COG1399.	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.857
SIS87588.1	rimM	SAMN05421759_10527	SAMN05421759_104239	Uncharacterized ACR, COG1399.	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.862
SIS87588.1	rplA	SAMN05421759_10527	SAMN05421759_11866	Uncharacterized ACR, COG1399.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.861
SIS87588.1	rplJ	SAMN05421759_10527	SAMN05421759_11864	Uncharacterized ACR, COG1399.	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.864
SIS87588.1	rplK	SAMN05421759_10527	SAMN05421759_11867	Uncharacterized ACR, COG1399.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.878
SIS87588.1	rpmF	SAMN05421759_10527	SAMN05421759_10528	Uncharacterized ACR, COG1399.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.963
SIS87588.1	rpsC	SAMN05421759_10527	SAMN05421759_11576	Uncharacterized ACR, COG1399.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.977
SIS87588.1	rpsF	SAMN05421759_10527	SAMN05421759_106102	Uncharacterized ACR, COG1399.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.858
SIS87588.1	rpsP	SAMN05421759_10527	SAMN05421759_104237	Uncharacterized ACR, COG1399.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.885
SIS87588.1	trmD	SAMN05421759_10527	SAMN05421759_104241	Uncharacterized ACR, COG1399.	tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.863
infC	SIS87588.1	SAMN05421759_102533	SAMN05421759_10527	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Uncharacterized ACR, COG1399.	0.857
infC	rimM	SAMN05421759_102533	SAMN05421759_104239	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.532
infC	rplA	SAMN05421759_102533	SAMN05421759_11866	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.938
infC	rplJ	SAMN05421759_102533	SAMN05421759_11864	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.897
infC	rplK	SAMN05421759_102533	SAMN05421759_11867	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.924
infC	rpmF	SAMN05421759_102533	SAMN05421759_10528	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.904
infC	rpsC	SAMN05421759_102533	SAMN05421759_11576	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.980
infC	rpsF	SAMN05421759_102533	SAMN05421759_106102	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.970
infC	rpsP	SAMN05421759_102533	SAMN05421759_104237	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.956
infC	trmD	SAMN05421759_102533	SAMN05421759_104241	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.541