STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS92313.1Iron-regulated ABC transporter membrane component SufB. (507 aa)    
Predicted Functional Partners:
SIS92385.1
Fe-S cluster assembly ATP-binding protein.
 
 0.999
SIS92395.1
Fe-S cluster assembly protein SufD.
 
0.999
SIS92435.1
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.997
SIS71212.1
FeS assembly SUF system protein.
   
 0.955
SIS71173.1
Iron-binding apoprotein IscA; Belongs to the HesB/IscA family.
  
 
 0.912
SIS88849.1
Cysteine desulfuration protein SufE.
 
 
 0.889
SIS97867.1
Selenocysteine lyase/Cysteine desulfurase.
 
 
 0.881
SIS92352.1
Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family.
  
  
 0.867
SIS71572.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.866
SIS92408.1
Yip1 domain-containing protein.
     
 0.831
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.