STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS91632.1Hint domain-containing protein. (166 aa)    
Predicted Functional Partners:
SIS83945.1
Pectate lyase superfamily protein.
  
 
   0.760
SIS54315.1
Core-2/I-Branching enzyme.
  
     0.645
SIT10581.1
Hypothetical protein.
  
     0.599
SIS53259.1
Hint domain-containing protein.
  
 
  0.583
SIS55915.1
Hypothetical protein.
  
     0.576
SIS85389.1
Hint domain-containing protein.
  
     0.573
SIS55787.1
MJ0042 family finger-like domain-containing protein.
  
     0.516
SIS53200.1
Hypothetical protein.
  
     0.511
SIS55935.1
Hypothetical protein.
  
     0.500
SIS54298.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.