STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS96703.1Hypothetical protein. (231 aa)    
Predicted Functional Partners:
SIS91134.1
Glycosyl transferase family 2.
  
  
  0.674
SIS96691.1
Protein of unknown function.
       0.664
SIS91112.1
Glycosyl transferase family 2.
  
  
  0.660
SIS77546.1
Hypothetical protein.
  
     0.635
SIS81951.1
Hypothetical protein.
  
  
  0.556
SIS81771.1
Hypothetical protein.
  
     0.547
SIS95349.1
Hypothetical protein.
  
     0.517
SIS96636.1
Putative rhamnosyl transferase.
  
     0.511
SIS97291.1
Glycosyl transferase family 2.
  
     0.501
SIS60343.1
Hypothetical protein.
  
     0.478
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.