Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS56389.1 | SIT02433.1 | SAMN05421759_101448 | SAMN05421759_110109 | Membrane protein YqaA, SNARE-associated domain. | Putative amidoligase enzyme. | 0.448 |
SIT02407.1 | SIT02422.1 | SAMN05421759_110107 | SAMN05421759_110108 | Hypothetical protein. | Putative glutamine amidotransferase. | 0.497 |
SIT02407.1 | SIT02433.1 | SAMN05421759_110107 | SAMN05421759_110109 | Hypothetical protein. | Putative amidoligase enzyme. | 0.497 |
SIT02407.1 | SIT02446.1 | SAMN05421759_110107 | SAMN05421759_110110 | Hypothetical protein. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.497 |
SIT02407.1 | SIT02453.1 | SAMN05421759_110107 | SAMN05421759_110111 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.497 |
SIT02407.1 | SIT02463.1 | SAMN05421759_110107 | SAMN05421759_110112 | Hypothetical protein. | Hypothetical protein. | 0.497 |
SIT02422.1 | SIT02407.1 | SAMN05421759_110108 | SAMN05421759_110107 | Putative glutamine amidotransferase. | Hypothetical protein. | 0.497 |
SIT02422.1 | SIT02433.1 | SAMN05421759_110108 | SAMN05421759_110109 | Putative glutamine amidotransferase. | Putative amidoligase enzyme. | 0.946 |
SIT02422.1 | SIT02446.1 | SAMN05421759_110108 | SAMN05421759_110110 | Putative glutamine amidotransferase. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.773 |
SIT02422.1 | SIT02453.1 | SAMN05421759_110108 | SAMN05421759_110111 | Putative glutamine amidotransferase. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.773 |
SIT02422.1 | SIT02463.1 | SAMN05421759_110108 | SAMN05421759_110112 | Putative glutamine amidotransferase. | Hypothetical protein. | 0.773 |
SIT02422.1 | SIT02478.1 | SAMN05421759_110108 | SAMN05421759_110113 | Putative glutamine amidotransferase. | Response regulator receiver protein. | 0.546 |
SIT02433.1 | SIS56389.1 | SAMN05421759_110109 | SAMN05421759_101448 | Putative amidoligase enzyme. | Membrane protein YqaA, SNARE-associated domain. | 0.448 |
SIT02433.1 | SIT02407.1 | SAMN05421759_110109 | SAMN05421759_110107 | Putative amidoligase enzyme. | Hypothetical protein. | 0.497 |
SIT02433.1 | SIT02422.1 | SAMN05421759_110109 | SAMN05421759_110108 | Putative amidoligase enzyme. | Putative glutamine amidotransferase. | 0.946 |
SIT02433.1 | SIT02446.1 | SAMN05421759_110109 | SAMN05421759_110110 | Putative amidoligase enzyme. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.775 |
SIT02433.1 | SIT02453.1 | SAMN05421759_110109 | SAMN05421759_110111 | Putative amidoligase enzyme. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.773 |
SIT02433.1 | SIT02463.1 | SAMN05421759_110109 | SAMN05421759_110112 | Putative amidoligase enzyme. | Hypothetical protein. | 0.773 |
SIT02433.1 | SIT02478.1 | SAMN05421759_110109 | SAMN05421759_110113 | Putative amidoligase enzyme. | Response regulator receiver protein. | 0.546 |
SIT02446.1 | SIT02407.1 | SAMN05421759_110110 | SAMN05421759_110107 | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | Hypothetical protein. | 0.497 |
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