STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT03118.13-hydroxyisobutyrate dehydrogenase. (321 aa)    
Predicted Functional Partners:
SIT03128.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
  0.936
SIS88079.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
  
 
  0.935
SIT09095.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.867
SIT12500.1
Propionate CoA-transferase.
  
  
  0.857
SIT04567.1
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.849
SIS76866.1
3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.790
SIT04796.1
3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.789
SIS88106.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
 
 
0.775
SIS70221.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
  
 
  0.761
SIS77278.1
Biotin carboxyl carrier protein /biotin carboxylase.
  
 
  0.761
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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