STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT05395.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (351 aa)    
Predicted Functional Partners:
SIT05367.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.950
SIT05357.1
Multiple sugar transport system permease protein.
 
  0.941
SIS89298.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.916
SIS89288.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.902
SIT00328.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.900
SIS72745.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.890
SIT13504.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.889
SIS69470.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
  0.874
SIT15442.1
Sorbitol ABC transporter membrane protein.
 
 0.853
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  0.817
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.