STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT06623.1Hypothetical protein. (679 aa)    
Predicted Functional Partners:
SIT06633.1
Rieske 2Fe-2S family protein.
 
 
 0.985
SIT06645.1
Ferredoxin-NADP reductase.
 
 
 0.973
SIS57374.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.949
SIS64513.1
Nitrite reductase (NADH) small subunit.
  
 0.897
SIT17630.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
    
 0.892
SIS76104.1
Sarcosine oxidase subunit delta.
 
 0.883
SIS81521.1
Electron transfer flavoprotein beta subunit.
  
 
 0.874
SIS54518.1
2,4-dienoyl-CoA reductase (NADPH2).
 
0.848
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.848
SIS67077.1
Thioredoxin reductase (NADPH).
  
 
 0.847
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.